2002, English, Article edition: ProDom: Automated clustering of homologous domains Servant, Florence; Bru, Catherine; Carrère, Sébastien; ...

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Bookmark: http://trove.nla.gov.au/version/207747
Physical Description
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Published
  • Oxford University Press
  • 2002-01-01 00:00:00.0
Language
  • English

Edition details

Title
  • ProDom: Automated clustering of homologous domains
Author
  • Servant, Florence
  • Bru, Catherine
  • Carrère, Sébastien
  • Courcelle, Emmanuel
  • Gouzy, Jérôme
  • Peyruc, David
  • Kahn, Daniel
Published
  • Oxford University Press
  • 2002-01-01 00:00:00.0
Physical Description
  • text/​html
Subjects
Notes
  • The ProDom database is a comprehensive set of protein domain families automatically generated from the SWISS-PROT and TrEMBL sequence databases. An associated database, ProDom-CG, has been derived as a restriction of ProDom to completely sequenced genomes. The ProDom construction method is based on iterative PSI-BLAST searches and multiple alignments are generated for each domain family. The ProDom web server provides the user with a set of tools to visualise multiple alignments, phylogenetic trees and domain architectures of proteins, as well as a BLAST-based server to analyse new sequences for homologous domains. The comprehensive nature of ProDom makes it particularly useful to help sustain the growth of InterPro.
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  • Copyright (C) 2002, Oxford University Press
Language
  • English
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